Iron loading in rice endosperm controlled by cell-type specific over-expression of OsNAS

Author: Bianca Anastasia Kyriacou

Kyriacou, Bianca Anastasia, 2013 Iron loading in rice endosperm controlled by cell-type specific over-expression of OsNAS, Flinders University, School of Biological Sciences

This electronic version is made publicly available by Flinders University in accordance with its open access policy for student theses. Copyright in this thesis remains with the author. This thesis may incorporate third party material which has been used by the author pursuant to Fair Dealing exceptions. If you are the owner of any included third party copyright material and/or you believe that any material has been made available without permission of the copyright owner please contact copyright@flinders.edu.au with the details.

Abstract

Over 50 years after the attempt to combat worldwide famine with the Green Revolution and the expansion of agricultural practices, we face new and equally challenging battles of combating human micronutrient malnutrition. The prevalence of iron (Fe) deficiency anaemia is tightly associated with the proportion of people reliant on cheap nutrient poor rice diets, particularly women and children in Asia and Africa (Kraemer and Zimmermann, 2007). There is an amazing depth of knowledge available that demonstrates the uptake and transport of Fe in rice plants but little research has successfully resulted in biologically significant Fe enriched rice. This thesis attempts to address this problem with the development and investigation of cell type specific over expression of OsNAS genes in rice. The ultimate aim is to develop rice with enriched Fe in the endosperm - the most commonly consumed portion of the grain. Iron uptake and translocation play a crucial role in the biochemistry of cell development in both animals and plants and as such, Fe must be tightly regulated. Plants acquire Fe via root transport of ferrous (Fe2+) and ferric (Fe3+) ions via transport mechanisms known as Strategy I (in dicots) and Strategy II (in monocots). An important factor in Fe accumulation in both dicots and monocots is the synthesis of nicotianamine (NA) molecules upon the activity of NA synthases. In Strategy I plants, NA is a well characterised Fe chelator, acting as a vehicle for Fe long distance transport. Strategy II plants, like rice, catalyse NA in the production of phytosiderophores, Fe3+ chelating molecules used to draw Fe in from the rhizosphere. There exist three NA synthase genes in rice; OsNAS1, OsNAS2 and 8 OsNAS3. It is known that each gene is spatially controlled across the plant at differing periods of Fe homeostasis (Cheng et al., 2007, Inoue et al., 2003). What is not known is why this happens and whether these genes present any redundancy value or if they have highly specified roles in Fe acquisition in rice. Chapter Two of this thesis investigates the effect of Fe accumulation in rice (Oryza sativa ssp. Japonica cv Nipponbare) endosperm when manipulated using transgenic lines over-expressing the three rice NAS genes OsNAS1, OsNAS2 and OsNAS3. The hypothesis states that a single OsNAS gene may lead to a more efficient Fe accumulator in the grain and that the cell type specific expression of this gene may influence this effect. In order to achieve cell type specific expression of these genes, GAL4 was used to control the enhancer trap system in root stele, root cortex and lodicules of developing grain, along with ovary of developing grain and leaf shoot tissues. Subsequent ICP-OES analysis of T1 grains indicated that Fe was enhanced up to two-fold in brown rice of root cortex-specific OsNAS2 over-expression and developing grain lodicules-specific OsNAS3 over-expression lines compared to the corresponding wild type. Furthermore, polished grains from transgenic plants retained up to 30% more Fe in the endosperm post-milling. In some cases 2-3 times more Fe was found in the grain of the transgenic than wildtype. We subsequently suggest there is not a redundancy between the three OsNAS genes, but that over-expression of OsNAS2 may in fact trigger endogenous expression of OsNAS1 and OsNAS3. This refers to the 'heterocot' nature of rice, where both strategies of Fe uptake (strategy I of dicots and strategy II of monocots) are utilised, enabling the NA to be produced for PS sequestration, Fe influx and Fe chelation and transport. 9 The exciting results from Chapter Two were further investigated in Chapter Three with the use of synchrotron radiation to visualise this increase in Fe accumulation in the grain. Traditionally, relatively little Fe is present in the endosperm, a fact worsened by the loss of 75-80% of Fe with the removal of the Fe rich bran and maternal tissue during milling (Briat et al., 1995). Levels of 14 µg g-1 Fe in the rice endosperm have been reported as the 'goal' for biofortified rice- over three times the typical concentration in consumed rice around the world. Grain developed in Chapter Two resulted in Fe concentrations of over 13 µg g-1 in the endosperm. It was therefore imperative to visualise the Fe distribution across the whole transgenic grain to ensure we had developed Fe enhanced rice that would provide increased nutritional benefit once milled. Interestingly, SXRF maps showed Fe was not limited to the aleurone and embryo but instead extended further into the sub aleurone and endosperm. Furthermore this increase in Fe was not co localised with P, a key indicator of the anti-nutrient phytate. This was further established with SXANES and nano-SIMS technology, highlighting the utility of multi-spectroscopic analysis of micronutrients in grain as well as suggesting a more bioavailable Fe enhanced rice grain. Research into biofortified foods designed to combat human micronutrient deficiencies would be unrealistic if geographic considerations of rice production were ignored. Over 50% of the world's population consume rice, and the majority of this is grown in Asia. Due to anthropogenic contamination of crop soils with heavy metals such as cadmium (Cd), it is of no surprise that the greatest vehicle for Cd consumption and toxicity in humans is in fact rice. Chapter Four explores the potential for heavy metal accumulation in the transgenic grain, as NA is known to 10 bind several metals such as Zn, Mn and Ni. It was hypothesised that the root specific over-expression of OsNAS2 would maintain enhanced levels of Fe in the grain when grown in Cd contaminated soils without increased the grain Cd concentrations. Interestingly, the converse of this was recorded, with Cd levels exceeding those allowed for human consumption in Australia and parts of Asia (Arao and Ae, 2003, Hseu et al., 2010) and Fe concentrations decreased from those found in previous generations. This demonstrates a relationship between NA and Cd - a relationship that has otherwise not been described in literature. As we have shown in this thesis and other publications (Johnson et al., 2011), there is an increase in endosperm Fe in transgenic rice over expressing OsNAS2. The final chapter of this thesis challenges the source-sink relationship of Fe accumulation and loading in the grain. We ask whether an endosperm specific promoter controlling the over-expression of a vacuolar iron transporter (OsVIT1) in the background of the OsNAS2 lines would result in further enhanced Fe loading than previously seen in the single transformant 35S OsNAS2 lines (Johnson et al., 2011). It is expected that as there is already in increase Fe accumulation in OsNAS2 grain, endosperm specific OsVIT1 will further drive Fe into the grain, beyond the aleurone and into the centre of the endosperm. Preliminary results suggest we were able to produce a rice line with relatively higher grain Fe concentrations and this gives rise to a multitude of future research possibilities in the future. Appendix One of this thesis contains the full manuscript of Johnson et al. (2011) as work from this thesis contributed to second authorship. The 35S OsNAS lines referred to in this thesis are further investigated in the manuscript of Appendix One. This work was published in PlosONE.

Keywords: Nicotianamine,rice,iron,speciation,distribution,cadmium,endosperm
Subject: Biological Sciences thesis

Thesis type: Doctor of Philosophy
Completed: 2013
School: School of Biological Sciences
Supervisor: Associate Professor James Stangoulis